C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIO kinase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000577501 RIOK3-002 ENSG00000101782 9606 + 18:23453308-23481500 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverLungPlacentaTestisENST00000577501
Transcript ID Bladder Brain Breast Heart Kidney Liver Lung Placenta Testis
ENST00000577501 2.475±0.00 2.144±0.64 3.852±0.00 0.606±0.00 1.752±0.00 2.516±0.00 4.340±0.43 2.487±0.00 8.261±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FI CIL_0002FI_0002 CGP 18:23197144-23486603
CIL_0005WY CIL_0005WY_0001 CGP 18:23452823-23531807

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0007059 TAS chromosome segregation
GO:0009103 IEA lipopolysaccharide biosynthetic process
GO:0016020 IEA membrane
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0016773 IEA phosphotransferase activity, alcohol group as acceptor

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025270 Riok3-201 protein_coding Mus_musculus 0 2019

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