C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | golgi-associated, gamma adaptin ear containing, ARF binding protein 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000578348  |
GGA3-004 |
ENSG00000125447 |
9606 | - |
17:75237284-75262361  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008PW | CIL_0008PW_0001 | VISTA | 17:75051738-75652852 |
| CIL_0007IW | CIL_0007IW_0001 | CGP | 17:75205659-75262363 |
| CIL_0007I1 | CIL_0007I1_0001 | CGP | 17:75236599-75266373 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005622 | IEA | intracellular |
| GO:0005768 | IEA | endosome |
| GO:0005802 | IEA:IDA | trans-Golgi network |
| GO:0006886 | IEA:NAS | intracellular protein transport |
| GO:0016192 | IEA | vesicle-mediated transport |
| GO:0030131 | IEA | clathrin adaptor complex |
| GO:0030306 | IEA:IDA | ADP-ribosylation factor binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000019135
|
Gga3-001 | protein_coding | Mus_musculus | 0 | 1450 |
|
ENSMUST00000156173
|
Gga3-003 | nonsense_mediated_decay | Mus_musculus | 0 | 1053 |
|
ENSMUST00000106508
|
Gga3-002 | protein_coding | Mus_musculus | 0 | 597 |
|
ENSMUST00000128437
|
Gga3-006 | processed_transcript | Mus_musculus | 0 | 540 |
|
ENSMUST00000123485
|
Gga3-010 | processed_transcript | Mus_musculus | 0 | 427 |
|
ENSMUST00000154832
|
Gga3-011 | processed_transcript | Mus_musculus | 4.00001e-40 | 171 |
|
ENSMUST00000041587
|
Gga1-201 | protein_coding | Mus_musculus | 0.0000000000002 | 82 |
