C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000578397 PSMD11-006 ENSG00000108671 9606 + 17:32444504-32477829 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VN CIL_0000VN_0001 CGP 17:32350117-32483318
CIL_0005RM CIL_0005RM_0003 CGP 17:32444261-32491256

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000147898 Psmd11-002 retained_intron Mus_musculus 0 1447
ENSMUST00000017572 Psmd11-001 protein_coding Mus_musculus 0 1447
ENSMUST00000173938 Psmd11-004 protein_coding Mus_musculus 0 1447
ENSMUST00000121864 Gm14048-001 processed_pseudogene Mus_musculus 0 1358
ENSMUST00000174743 Psmd11-009 nonsense_mediated_decay Mus_musculus 0 935
ENSMUST00000173565 Psmd11-012 protein_coding Mus_musculus 0 826
ENSMUST00000172615 Psmd11-011 nonsense_mediated_decay Mus_musculus 0 512
ENSMUST00000173060 Psmd11-010 nonsense_mediated_decay Mus_musculus 0 503
ENSMUST00000172773 Psmd11-014 nonsense_mediated_decay Mus_musculus 0 481
ENSMUST00000172847 Psmd11-013 nonsense_mediated_decay Mus_musculus 0 449
ENSMUST00000148895 Psmd11-008 protein_coding Mus_musculus 0 433
ENSMUST00000173186 Psmd11-015 nonsense_mediated_decay Mus_musculus 0 409
ENSMUST00000172641 Psmd11-003 retained_intron Mus_musculus 0 329
ENSMUST00000129500 Psmd11-005 protein_coding Mus_musculus 0 268
ENSMUST00000173797 Psmd11-006 protein_coding Mus_musculus 0 209
ENSMUST00000125591 Psmd11-007 nonsense_mediated_decay Mus_musculus 0 202

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