C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148895 Psmd11-008 ENSMUSG00000017428 10090 + 11:80456368-80471875 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000148895
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000148895 27.531±0.00 36.482±0.00 46.061±16.10 28.441±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VN CIL_0000VN_0002 CGP 11:80383279-80473248
CIL_0005RM CIL_0005RM_0004 CGP 11:80428615-80481184

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005838 IDA proteasome regulatory particle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261712 PSMD11-001 protein_coding Homo_sapiens 0 773
ENST00000457654 PSMD11-004 protein_coding Homo_sapiens 0 547
ENST00000469475 PSMD11-003 retained_intron Homo_sapiens 0 540
ENST00000493026 PSMD11-002 retained_intron Homo_sapiens 0 315
ENST00000578397 PSMD11-006 retained_intron Homo_sapiens 0 433
ENST00000584340 PSMD11-010 nonsense_mediated_decay Homo_sapiens 0 326
ENST00000585265 PSMD11-011 retained_intron Homo_sapiens 0 453

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