C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: StAR-related lipid transfer (START) domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000578577 STARD3-011 ENSG00000131748 9606 + 17:39637142-39663007 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartLungOvaryPlacentaTestisENST00000578577
Transcript ID Bladder Brain Colon Heart Lung Ovary Placenta Testis
ENST00000578577 1.112±0.00 1.469±0.00 1.957±0.00 2.161±1.72 1.400±0.00 9.664±7.58 14.146±0.00 22.123±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SN CIL_0008SN_0001 VISTA 17:39110111-39710718
CIL_00080Z CIL_00080Z_0001 VISTA 17:39318232-39918735
CIL_00098W CIL_00098W_0001 VISTA 17:39359510-39962707
CIL_0007WH CIL_0007WH_0001 VISTA 17:39374871-39978277
CIL_0000TI CIL_0000TI_0002 CGP 17:39626740-39663484
CIL_00023N CIL_00023N_0001 CGP 17:39637065-39666555

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000154960 Stard3-002 processed_transcript Mus_musculus 0 1134
ENSMUST00000018311 Stard3-001 protein_coding Mus_musculus 0 1134
ENSMUST00000130323 Stard3-006 processed_transcript Mus_musculus 0 702
ENSMUST00000155063 Stard3-005 processed_transcript Mus_musculus 0 497
ENSMUST00000148738 Stard3-004 processed_transcript Mus_musculus 0 490
ENSMUST00000152559 Stard3-003 processed_transcript Mus_musculus 0 340

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