C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RNA binding protein, fox-1 homolog (C. elegans) 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000578998 RBFOX3-005 ENSG00000167281 9606 - 17:79090847-79100410 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonLiverENST00000578998
Transcript ID Adipose Breast Colon Liver
ENST00000578998 0.045±0.00 0.097±0.00 0.047±0.00 0.028±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002YN CIL_0002YN_0001 CGP 17:79074939-79516148
CIL_0002XY CIL_0002XY_0001 CGP 17:79089345-79742222

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106278 Rbfox3-008 protein_coding Mus_musculus 0 496
ENSMUST00000103023 Rbfox3-001 protein_coding Mus_musculus 0 496
ENSMUST00000120061 Rbfox3-009 protein_coding Mus_musculus 0 429
ENSMUST00000117731 Rbfox3-007 protein_coding Mus_musculus 0 270
ENSMUST00000069343 Rbfox3-003 protein_coding Mus_musculus 0 270
ENSMUST00000017576 Rbfox3-002 protein_coding Mus_musculus 0 204

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