C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BRCA1 interacting protein C-terminal helicase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000579028 BRIP1-005 ENSG00000136492 9606 - 17:61776401-61793673 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastLungENST00000579028
Transcript ID Adipose Adrenal Breast Lung
ENST00000579028 0.315±0.00 0.366±0.00 0.179±0.00 0.354±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JV CIL_0007JV_0001 UCNEbase 17:61126460-61946035
CIL_00096P CIL_00096P_0001 VISTA 17:61515758-62116780
CIL_0006ZY CIL_0006ZY_0001 CGP 17:61681266-61928016

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044423 Brip1-001 protein_coding Mus_musculus 0 551

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