C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: src kinase associated phosphoprotein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000581400 SKAP1-006 ENSG00000141293 9606 - 17:48137229-48346005 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartOvaryPlacentaTestisENST00000581400
Transcript ID Adrenal Breast Colon Heart Ovary Placenta Testis
ENST00000581400 2.283±0.00 0.460±0.02 0.636±0.00 0.074±0.00 2.129±0.00 0.744±0.00 6.956±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RQ CIL_0007RQ_0001 VISTA 17:47700006-48306250
CIL_0007WA CIL_0007WA_0001 VISTA 17:47751636-48352675
CIL_00097B CIL_00097B_0001 VISTA 17:47849190-48450331

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103154 Skap1-001 protein_coding Mus_musculus 0 407
ENSMUST00000071510 Skap1-009 protein_coding Mus_musculus 0 287
ENSMUST00000123814 Skap1-006 retained_intron Mus_musculus 5e-40 169
ENSMUST00000136836 Skap1-007 retained_intron Mus_musculus 5e-40 169
ENSMUST00000100521 Skap1-008 protein_coding Mus_musculus 5e-40 169

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