C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIO kinase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000581585 RIOK3-008 ENSG00000101782 9606 + 18:23453287-23481580 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000581585
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000581585 4.106±0.00 1.275±0.00 1.845±0.00 4.627±0.00 3.108±1.92 6.056±0.00 2.035±0.00 2.487±0.00 2.500±0.00 3.029±0.00 4.525±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FI CIL_0002FI_0002 CGP 18:23197144-23486603
CIL_0005WY CIL_0005WY_0001 CGP 18:23452823-23531807

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0009103 IEA lipopolysaccharide biosynthetic process
GO:0016020 IEA membrane
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0016773 IEA phosphotransferase activity, alcohol group as acceptor

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025270 Riok3-201 protein_coding Mus_musculus 0 1796

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