C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sorting nexin 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000581705 SNX11-007 ENSG00000002919 9606 + 17:48107576-48121886 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverTestisENST00000581705
Transcript ID Bladder Liver Testis
ENST00000581705 0.242±0.00 0.287±0.00 3.255±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RQ CIL_0007RQ_0001 VISTA 17:47700006-48306250
CIL_0007WA CIL_0007WA_0001 VISTA 17:47751636-48352675
CIL_00097B CIL_00097B_0001 VISTA 17:47849190-48450331

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006886 IEA intracellular protein transport
GO:0035091 IEA phosphatidylinositol binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000127375 Snx11-003 protein_coding Mus_musculus 0 263
ENSMUST00000021246 Snx11-002 protein_coding Mus_musculus 0 263
ENSMUST00000107661 Snx11-001 protein_coding Mus_musculus 2e-25 121

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