C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 47
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000582252 CCDC47-003 ENSG00000108588 9606 - 17:63751770-63773570 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartKidneyLiverLungENST00000582252
Transcript ID Bladder Breast Heart Kidney Liver Lung
ENST00000582252 9.069±0.00 7.152±0.00 3.423±0.00 8.789±0.00 9.592±0.00 11.059±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B9 CIL_0009B9_0001 VISTA 17:63374232-63977730
CIL_0006Q3 CIL_0006Q3_0001 CGP 17:63745250-63819317

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001649 IDA osteoblast differentiation
GO:0005515 IPI protein binding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002043 Ccdc47-001 protein_coding Mus_musculus 0 1964
ENSMUST00000121523 Gm12097-001 processed_pseudogene Mus_musculus 0 1596
ENSMUST00000125383 Ccdc47-005 protein_coding Mus_musculus 0 874
ENSMUST00000106865 Ccdc47-003 protein_coding Mus_musculus 0 612
ENSMUST00000137915 Ccdc47-004 protein_coding Mus_musculus 0 468

Loading