C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: musashi RNA-binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000582453 MSI2-014 ENSG00000153944 9606 + 17:57256774-57565995 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000880 CIL_000880_0001 VISTA 17:57137969-57739404
CIL_0008GV CIL_0008GV_0001 VISTA 17:57172762-57775247
CIL_0007R8 CIL_0007R8_0001 VISTA 17:57241317-57842812

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092794 Msi2-006 protein_coding Mus_musculus 0 691
ENSMUST00000107909 Msi2-001 protein_coding Mus_musculus 0 691
ENSMUST00000138790 Msi2-002 retained_intron Mus_musculus 0 689
ENSMUST00000144699 Msi2-003 protein_coding Mus_musculus 0 577
ENSMUST00000107908 Msi2-005 protein_coding Mus_musculus 0 499
ENSMUST00000126293 Msi2-004 processed_transcript Mus_musculus 0 497
ENSDART00000154311 msi2b-002 retained_intron Danio_rerio 0 470
ENSDART00000050649 msi2b-005 protein_coding Danio_rerio 0 470
ENSDART00000100194 msi2b-001 protein_coding Danio_rerio 0 470
ENSDART00000152414 msi2b-011 protein_coding Danio_rerio 0 449
ENSDART00000099473 msi2a-201 protein_coding Danio_rerio 0 403
ENSDART00000132096 msi2a-001 protein_coding Danio_rerio 0 403
ENSDART00000145918 msi2b-015 protein_coding Danio_rerio 0 396
ENSDART00000152330 msi2b-009 protein_coding Danio_rerio 0 392
ENSDART00000152790 msi2b-010 protein_coding Danio_rerio 0 374
ENSDART00000156160 msi2b-008 protein_coding Danio_rerio 0 363
ENSDART00000135642 msi2a-002 retained_intron Danio_rerio 0 353
ENSDART00000134104 msi2a-004 retained_intron Danio_rerio 0 335
ENSDART00000141183 msi2a-003 retained_intron Danio_rerio 0 244

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