C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | vacuole membrane protein 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000586245  |
VMP1-011 |
ENSG00000062716 |
9606 | + |
17:59707650-59765111  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00081F | CIL_00081F_0001 | VISTA | 17:59485788-60087415 |
| CIL_0008Y2 | CIL_0008Y2_0001 | VISTA | 17:59536739-60138754 |
| CIL_0008VS | CIL_0008VS_0001 | VISTA | 17:59556856-60159441 |
| CIL_000567 | CIL_000567_0002 | CGP | 17:59707192-59892945 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000127267
|
Vmp1-006 | processed_transcript | Mus_musculus | 0 | 457 |
|
ENSMUST00000018315
|
Vmp1-001 | protein_coding | Mus_musculus | 0 | 457 |
|
ENSMUST00000139040
|
Vmp1-007 | processed_transcript | Mus_musculus | 0 | 230 |
|
ENSMUST00000143991
|
Vmp1-008 | protein_coding | Mus_musculus | 4e-29 | 132 |
