C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: INO80 complex subunit C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000586489 INO80C-009 ENSG00000153391 9606 - 18:35468584-35497649 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonLungOvaryTestisENST00000586489
Transcript ID Adipose Bladder Brain Breast Colon Lung Ovary Testis
ENST00000586489 3.749±0.00 0.428±0.00 0.404±0.00 2.948±0.00 0.748±0.00 0.343±0.00 0.403±0.00 26.261±2.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FM CIL_0002FM_0002 CGP 18:35452230-35711834

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006338 IEA chromatin remodeling
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0031011 IEA Ino80 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000125169 Ino80c-003 protein_coding Mus_musculus 0 571
ENSMUST00000153360 Ino80c-001 protein_coding Mus_musculus 0 571
ENSMUST00000055012 Ino80c-004 protein_coding Mus_musculus 0 394

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