C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family A (ABC1), member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000586539 ABCA8-003 ENSG00000141338 9606 - 17:68868052-68955241 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000586539
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000586539 4.713±0.00 0.897±0.00 0.912±0.00 1.650±0.00 3.819±0.00 4.636±2.54 2.708±1.00 3.536±0.00 2.266±1.94 2.645±0.06 0.368±0.00 2.992±0.37 0.736±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005743 IEA mitochondrial inner membrane
GO:0005886 TAS plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0006810 IDA transport
GO:0016021 IEA integral component of membrane
GO:0016887 IEA ATPase activity
GO:0042626 IDA ATPase activity, coupled to transmembrane movement of substances
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020948 Abca8b-001 protein_coding Mus_musculus 0 3450
ENSMUST00000106669 Abca8b-002 protein_coding Mus_musculus 0 2819
ENSMUST00000046223 Abca8a-201 protein_coding Mus_musculus 0 1592
ENSMUST00000106664 Abca8a-202 protein_coding Mus_musculus 0 1232
ENSMUST00000100287 Abca8a-001 protein_coding Mus_musculus 0 1232
ENSMUST00000044850 Abca9-001 protein_coding Mus_musculus 0 1118
ENSMUST00000146635 Abca8a-003 protein_coding Mus_musculus 0 398
ENSMUST00000141279 Abca8a-006 processed_transcript Mus_musculus 0 316

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