C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000587110 RP11-209M4.1-001 ENSG00000267253 9606 - 17:43718314-43720436 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000587110
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000587110 0.023±0.00 0.072±0.00 0.042±0.01 0.077±0.00 0.056±0.00 0.015±0.01 0.048±0.00 0.060±0.03 0.016±0.00 0.005±0.00 0.012±0.01 0.019±0.00 0.137±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000996 CIL_000996_0001 VISTA 17:43262867-43863532
CIL_00090X CIL_00090X_0001 VISTA 17:43291368-43892559
CIL_000997 CIL_000997_0001 VISTA 17:43327654-43928719
CIL_00059O CIL_00059O_0001 CGP 17:43640388-43758788

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084026 Whsc1l1-201 protein_coding Mus_musculus 0 902
ENSMUST00000139966 Whsc1l1-006 protein_coding Mus_musculus 0 902
ENSMUST00000142395 Whsc1l1-005 protein_coding Mus_musculus 0 902
ENSMUST00000143445 Whsc1l1-004 retained_intron Mus_musculus 0 902
ENSMUST00000146919 Whsc1l1-003 protein_coding Mus_musculus 0 902
ENSMUST00000136107 Whsc1l1-002 retained_intron Mus_musculus 0 902
ENSMUST00000155861 Whsc1l1-001 protein_coding Mus_musculus 0 902

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