| Transcript ID | Brain | Ovary | Placenta | Testis |
|---|---|---|---|---|
| ENSMUST00000139966 | 4.963±0.00 | 1.882±0.75 | 5.377±0.00 | 2.311±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | Wolf-Hirschhorn syndrome candidate 1-like 1 (human) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000139966  |
Whsc1l1-006 |
ENSMUSG00000054823 |
10090 | + |
8:25602284-25714970  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008D9 | CIL_0008D9_0002 | VISTA | 8:25042689-25644335 |
| CIL_0008H7 | CIL_0008H7_0002 | VISTA | 8:25139932-25741457 |
| CIL_0008SM | CIL_0008SM_0002 | VISTA | 8:25140188-25742103 |
| CIL_0008NR | CIL_0008NR_0002 | VISTA | 8:25243011-25845762 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005634 | IEA | nucleus |
| GO:0008270 | IEA | zinc ion binding |
| GO:0042800 | IDA | histone methyltransferase activity (H3-K4 specific) |
| GO:0045892 | IDA | negative regulation of transcription, DNA-templated |
| GO:0046976 | IDA | histone methyltransferase activity (H3-K27 specific) |
| GO:0051568 | IDA | histone H3-K4 methylation |
| GO:0070734 | IDA | histone H3-K27 methylation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000138045
|
whsc1l1-001 | protein_coding | Danio_rerio | 0 | 206 |
|
ENSDART00000091115
|
whsc1l1-201 | protein_coding | Danio_rerio | 6e-32 | 145 |
|
ENST00000316985
|
WHSC1L1-002 | protein_coding | Homo_sapiens | 0 | 1788 |
|
ENST00000317025
|
WHSC1L1-001 | protein_coding | Homo_sapiens | 0 | 2564 |
|
ENST00000433384
|
WHSC1L1-003 | protein_coding | Homo_sapiens | 0 | 4409 |
|
ENST00000526050
|
WHSC1L1-013 | retained_intron | Homo_sapiens | 0 | 339 |
|
ENST00000527502
|
WHSC1L1-005 | protein_coding | Homo_sapiens | 0 | 2564 |
|
ENST00000528304
|
WHSC1L1-012 | retained_intron | Homo_sapiens | 0 | 255 |
|
ENST00000528627
|
WHSC1L1-011 | protein_coding | Homo_sapiens | 0 | 252 |
|
ENST00000528828
|
WHSC1L1-004 | retained_intron | Homo_sapiens | 0 | 767 |
|
ENST00000529223
|
WHSC1L1-009 | protein_coding | Homo_sapiens | 0 | 675 |
|
ENST00000534155
|
WHSC1L1-008 | protein_coding | Homo_sapiens | 0 | 453 |
|
ENST00000534539
|
WHSC1L1-010 | protein_coding | Homo_sapiens | 2e-39 | 165 |
|
ENST00000587110
|
RP11-209M4.1-001 | processed_pseudogene | Homo_sapiens | 0 | 902 |
