C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: PSMC3 interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000587209 PSMC3IP-007 ENSG00000131470 9606 - 17:42572343-42577697 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000587209
Transcript ID Ovary Placenta Testis
ENST00000587209 8.370±0.00 2.822±0.00 6.154±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004GR CIL_0004GR_0001 CGP 17:42561467-42573239
CIL_00045X CIL_00045X_0001 CGP 17:42567068-42577831
CIL_00045R CIL_00045R_0001 CGP 17:42572315-42610623

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004871 IEA signal transducer activity
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000126386 Psmc3ip-002 retained_intron Mus_musculus 0 782
ENSMUST00000019447 Psmc3ip-001 protein_coding Mus_musculus 0 725
ENSMUST00000142545 Psmc3ip-004 nonsense_mediated_decay Mus_musculus 0 568
ENSMUST00000134520 Psmc3ip-003 retained_intron Mus_musculus 0 440

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