C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | G patch domain containing 8 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000587228  |
GPATCH8-002 |
ENSG00000186566 |
9606 | - |
17:44397416-44503404  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0009B6 | CIL_0009B6_0001 | VISTA | 17:43966083-44567774 |
| CIL_0007ST | CIL_0007ST_0001 | VISTA | 17:44247434-44848646 |
| CIL_0005IZ | CIL_0005IZ_0001 | CGP | 17:44372180-44503430 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005575 | ND | cellular_component |
| GO:0008150 | ND | biological_process |
| GO:0044822 | IDA | poly(A) RNA binding |
| GO:0046872 | IEA | metal ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000143842
|
Gpatch8-001 | protein_coding | Mus_musculus | 0 | 5404 |
|
ENSMUST00000069673
|
Gpatch8-002 | processed_transcript | Mus_musculus | 0 | 4684 |
|
ENSMUST00000131573
|
Gpatch8-005 | processed_transcript | Mus_musculus | 0 | 556 |
|
ENSMUST00000126804
|
Gpatch8-004 | processed_transcript | Mus_musculus | 0 | 309 |
|
ENSMUST00000127018
|
Gpatch8-006 | processed_transcript | Mus_musculus | 0 | 237 |
|
ENSMUST00000125754
|
Gpatch8-003 | processed_transcript | Mus_musculus | 0 | 235 |
