C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutathione peroxidase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000587648 GPX4-009 ENSG00000167468 9606 + 19:1105152-1106564 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonLiverLungMuscleOvaryPlacentaTestisENST00000587648
Transcript ID Bladder Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENST00000587648 9.247±0.00 8.959±0.00 5.933±0.00 9.770±0.00 10.955±0.00 35.264±0.00 12.681±0.00 16.592±0.00 67.682±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QU CIL_0000QU_0001 CGP 19:1086579-1106791
CIL_0000QT CIL_0000QT_0001 CGP 19:1103926-1174283

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004602 IEA glutathione peroxidase activity
GO:0006979 IEA response to oxidative stress
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183037 Gpx4-007 protein_coding Mus_musculus 0 592
ENSMUST00000097227 Gpx4-002 protein_coding Mus_musculus 0 588
ENSMUST00000105372 Gpx4-001 protein_coding Mus_musculus 0 588
ENSMUST00000145703 Gpx4-003 processed_transcript Mus_musculus 0 424

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