C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cold inducible RNA binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000588230 CIRBP-036 ENSG00000099622 9606 + 19:1269332-1272477 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000588230
Transcript ID Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000588230 8.096±0.00 5.114±0.00 7.816±0.00 16.875±13.27 3.980±0.00 14.036±0.00 39.480±30.76 78.177±70.65 40.136±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QP CIL_0000QP_0001 CGP 19:1248553-1274880
CIL_0000QS CIL_0000QS_0001 CGP 19:1259384-1279249

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000151321 Cirbp-003 retained_intron Mus_musculus 8e-19 99
ENSMUST00000140774 Cirbp-002 retained_intron Mus_musculus 8e-19 99

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