C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000QS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000099622-ENSG00000228300 CGP 9606 19:1259384-1279249
GeneTranscriptPositionBiotype
ENSG00000099622 (CIRBP)
cold inducible RNA binding protein 		ENST00000320936 (CIRBP-001) 1269337-1273172 protein_coding
ENST00000413636 (CIRBP-008) 1269332-1273172 protein_coding
ENST00000444172 (CIRBP-043) 1271982-1274806 nonsense_mediated_decay
ENST00000585630 (CIRBP-037) 1269266-1272582 protein_coding
ENST00000585913 (CIRBP-035) 1267412-1274810 nonsense_mediated_decay
ENST00000585914 (CIRBP-007) 1269352-1274773 nonsense_mediated_decay
ENST00000586472 (CIRBP-034) 1266653-1273172 protein_coding
ENST00000586548 (CIRBP-021) 1267339-1273172 protein_coding
ENST00000586555 (CIRBP-045) 1273504-1274810 retained_intron
ENST00000586636 (CIRBP-033) 1269347-1274880 nonsense_mediated_decay
ENST00000586773 (CIRBP-025) 1269327-1274595 protein_coding
ENST00000587169 (CIRBP-004) 1269335-1274810 nonsense_mediated_decay
ENST00000587323 (CIRBP-029) 1269330-1272550 protein_coding
ENST00000587896 (CIRBP-032) 1269337-1272550 protein_coding
ENST00000588030 (CIRBP-011) 1259384-1273172 protein_coding
ENST00000588090 (CIRBP-018) 1267088-1273172 protein_coding
ENST00000588230 (CIRBP-036) 1269332-1272477 protein_coding
ENST00000588344 (CIRBP-017) 1270943-1273104 protein_coding
ENST00000588411 (CIRBP-015) 1261156-1271433 protein_coding
ENST00000588917 (CIRBP-044) 1272925-1274810 retained_intron
ENST00000589161 (CIRBP-016) 1261821-1264698 retained_intron
ENST00000589235 (CIRBP-006) 1269350-1274810 protein_coding
ENST00000589266 (CIRBP-042) 1266798-1271360 protein_coding
ENST00000589686 (CIRBP-031) 1269331-1271995 protein_coding
ENST00000589710 (CIRBP-005) 1269266-1273172 protein_coding
ENST00000590171 (CIRBP-030) 1269356-1272374 nonsense_mediated_decay
ENST00000590188 (CIRBP-041) 1272917-1274810 processed_transcript
ENST00000590347 (CIRBP-009) 1269333-1274810 nonsense_mediated_decay
ENST00000590704 (CIRBP-003) 1269332-1272777 retained_intron
ENST00000591055 (CIRBP-026) 1269348-1272803 nonsense_mediated_decay
ENST00000591097 (CIRBP-010) 1269332-1272604 nonsense_mediated_decay
ENST00000591376 (CIRBP-027) 1269348-1274880 nonsense_mediated_decay
ENST00000591622 (CIRBP-022) 1261342-1264572 retained_intron
ENST00000591659 (CIRBP-024) 1269351-1271639 protein_coding
ENST00000591935 (CIRBP-020) 1267229-1274480 protein_coding
ENST00000592051 (CIRBP-013) 1261382-1271029 protein_coding
ENST00000592234 (CIRBP-039) 1271030-1274810 nonsense_mediated_decay
ENST00000592412 (CIRBP-014) 1269331-1272041 nonsense_mediated_decay
ENST00000592467 (CIRBP-012) 1261166-1264572 retained_intron
ENST00000592815 (CIRBP-019) 1267154-1271151 protein_coding
ENST00000593048 (CIRBP-028) 1269336-1272600 nonsense_mediated_decay
ENST00000593093 (CIRBP-002) 1269332-1274807 retained_intron
ENST00000593128 (CIRBP-023) 1269331-1272552 retained_intron
ENST00000593283 (CIRBP-038) 1269332-1272057 retained_intron
ENST00000621399 (CIRBP-040) 1273554-1274805 retained_intron
ENSG00000228300 (C19orf24)
chromosome 19 open reading frame 24 		ENST00000409293 (C19orf24-001) 1275438-1279249 protein_coding
ENST00000469144 (C19orf24-003) 1276021-1279244 protein_coding
ENST00000485191 (C19orf24-004) 1276093-1279244 retained_intron
ENST00000585716 (C19orf24-006) 1276876-1279244 processed_transcript
ENST00000590269 (C19orf24-005) 1276100-1278836 processed_transcript
CIL_0000QS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045193-ENSMUSG00000035595 CGP 10090 10:80165985-80175146
GeneTranscriptPositionBiotype
ENSMUSG00000035595 (1600002K03Rik)
RIKEN cDNA 1600002K03 gene 		ENSMUST00000041882 (1600002K03Rik-001) 80172944-80175146 protein_coding
ENSMUSG00000045193 (Cirbp)
cold inducible RNA binding protein 		ENSMUST00000054666 (Cirbp-005) 80167840-80172786 protein_coding
ENSMUST00000105365 (Cirbp-001) 80167778-80171655 protein_coding
ENSMUST00000139935 (Cirbp-004) 80167863-80170129 retained_intron
ENSMUST00000140774 (Cirbp-002) 80167886-80171137 retained_intron
ENSMUST00000147190 (Cirbp-006) 80171982-80172698 retained_intron
ENSMUST00000151321 (Cirbp-003) 80170227-80171204 retained_intron
ENSMUST00000154726 (Cirbp-007) 80165985-80170316 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000QS_0001ENSG00000099622ENST00000320936ENST00000413636ENST00000585913ENST00000586472ENST00000587169ENST00000588230ENST00000589266ENST00000589710ENST00000593048ENST00000593093ENSG00000228300ENST00000409293ENST00000469144ENST00000485191ENST00000585716ENST00000590269CIL_0000QS_0002ENSMUSG00000035595ENSMUST00000041882ENSMUSG00000045193ENSMUST00000054666ENSMUST00000105365ENSMUST00000140774ENSMUST00000151321ENSMUST00000154726
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000099622 ENST00000320936 190.198±0.00 360.355±0.00 N/A 139.066±113.32 113.826±105.64 43.875±30.22 73.212±0.00 35.923±26.34 29.695±1.13 41.576±22.12 49.220±38.73 86.533±57.72 186.970±0.00 164.588±14.28
ENST00000413636 N/A N/A N/A N/A 2.234±0.00 N/A N/A 2.210±0.00 N/A N/A N/A N/A N/A N/A
ENST00000444172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585913 N/A N/A N/A N/A N/A 121.742±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586472 N/A N/A 15.037±0.00 N/A N/A N/A 9.699±0.00 N/A N/A N/A N/A 173.995±98.25 122.257±7.73 N/A
ENST00000586548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587169 N/A N/A N/A N/A N/A N/A N/A 22.085±0.00 N/A N/A N/A 35.973±0.00 N/A N/A
ENST00000587323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588230 N/A N/A 8.096±0.00 N/A 5.114±0.00 7.816±0.00 16.875±13.27 3.980±0.00 14.036±0.00 39.480±30.76 N/A 78.177±70.65 40.136±0.00 N/A
ENST00000588344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.992±0.00 148.330±0.00 220.320±0.00 369.572±0.00
ENST00000589686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589710 N/A N/A N/A N/A N/A N/A N/A 2.019±0.00 N/A N/A N/A N/A N/A N/A
ENST00000590171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593048 N/A N/A N/A 179.414±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593093 N/A N/A 2.183±0.00 N/A 0.894±0.00 1.707±0.00 0.806±0.00 N/A N/A 2.353±0.00 N/A N/A N/A N/A
ENST00000593128 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000228300 ENST00000409293 11.444±0.00 31.840±0.00 0.179±0.00 3.345±2.16 13.555±12.56 7.616±7.06 3.503±3.15 10.517±7.51 39.374±0.00 15.677±0.00 3.985±3.19 17.883±6.21 27.303±4.76 13.569±2.70
ENST00000469144 14.611±0.00 20.401±0.00 N/A 1.959±1.52 9.354±0.00 6.031±0.00 N/A 7.996±0.00 N/A 0.695±0.00 0.862±0.00 10.076±7.49 14.927±1.90 15.169±10.01
ENST00000485191 N/A N/A N/A N/A 0.232±0.00 N/A N/A N/A N/A N/A N/A 0.706±0.47 N/A N/A
ENST00000585716 N/A N/A 1.324±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590269 N/A N/A N/A N/A N/A N/A N/A 0.525±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035595 ENSMUST00000041882 6.063±0.00 18.079±0.00 N/A 4.035±0.00 5.662±3.54 7.875±1.74 N/A N/A 5.888±2.08 N/A 5.891±0.54 9.039±2.41 11.141±2.16 1.540±0.00
ENSMUSG00000045193 ENSMUST00000054666 N/A N/A N/A N/A N/A N/A N/A N/A 3.264±0.46 N/A 9.554±1.53 N/A 3.778±0.00 N/A
ENSMUST00000105365 18.678±2.55 N/A 43.888±3.12 58.101±18.80 19.787±6.80 14.546±2.25 22.195±9.35 19.995±3.12 7.186±1.84 40.138±4.52 24.746±2.22 25.339±8.56 10.096±5.80 43.343±17.04
ENSMUST00000139935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140774 13.451±3.61 37.989±9.40 36.311±8.97 51.652±0.00 16.456±4.21 N/A 6.447±0.35 9.547±0.76 3.889±1.25 25.790±5.53 7.319±0.29 25.671±9.18 6.468±2.18 N/A
ENSMUST00000147190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151321 N/A N/A N/A N/A 7.258±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154726 N/A N/A N/A 59.919±0.00 N/A N/A N/A N/A N/A N/A N/A 35.520±0.00 11.686±0.04 68.886±0.00

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