C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0000QP_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000167470-ENSG00000099622 | CGP | 9606 | 19:1248553-1274880  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000099622  (CIRBP)cold inducible RNA binding protein |
ENST00000320936 (CIRBP-001)
|
1269337-1273172 | protein_coding | |
|
ENST00000413636 (CIRBP-008)
|
1269332-1273172 | protein_coding | ||
|
ENST00000444172 (CIRBP-043)
|
1271982-1274806 | nonsense_mediated_decay | ||
|
ENST00000585630 (CIRBP-037)
|
1269266-1272582 | protein_coding | ||
|
ENST00000585913 (CIRBP-035)
|
1267412-1274810 | nonsense_mediated_decay | ||
|
ENST00000585914 (CIRBP-007)
|
1269352-1274773 | nonsense_mediated_decay | ||
|
ENST00000586472 (CIRBP-034)
|
1266653-1273172 | protein_coding | ||
|
ENST00000586548 (CIRBP-021)
|
1267339-1273172 | protein_coding | ||
|
ENST00000586555 (CIRBP-045)
|
1273504-1274810 | retained_intron | ||
|
ENST00000586636 (CIRBP-033)
|
1269347-1274880 | nonsense_mediated_decay | ||
|
ENST00000586773 (CIRBP-025)
|
1269327-1274595 | protein_coding | ||
|
ENST00000587169 (CIRBP-004)
|
1269335-1274810 | nonsense_mediated_decay | ||
|
ENST00000587323 (CIRBP-029)
|
1269330-1272550 | protein_coding | ||
|
ENST00000587896 (CIRBP-032)
|
1269337-1272550 | protein_coding | ||
|
ENST00000588030 (CIRBP-011)
|
1259384-1273172 | protein_coding | ||
|
ENST00000588090 (CIRBP-018)
|
1267088-1273172 | protein_coding | ||
|
ENST00000588230 (CIRBP-036)
|
1269332-1272477 | protein_coding | ||
|
ENST00000588344 (CIRBP-017)
|
1270943-1273104 | protein_coding | ||
|
ENST00000588411 (CIRBP-015)
|
1261156-1271433 | protein_coding | ||
|
ENST00000588917 (CIRBP-044)
|
1272925-1274810 | retained_intron | ||
|
ENST00000589161 (CIRBP-016)
|
1261821-1264698 | retained_intron | ||
|
ENST00000589235 (CIRBP-006)
|
1269350-1274810 | protein_coding | ||
|
ENST00000589266 (CIRBP-042)
|
1266798-1271360 | protein_coding | ||
|
ENST00000589686 (CIRBP-031)
|
1269331-1271995 | protein_coding | ||
|
ENST00000589710 (CIRBP-005)
|
1269266-1273172 | protein_coding | ||
|
ENST00000590171 (CIRBP-030)
|
1269356-1272374 | nonsense_mediated_decay | ||
|
ENST00000590188 (CIRBP-041)
|
1272917-1274810 | processed_transcript | ||
|
ENST00000590347 (CIRBP-009)
|
1269333-1274810 | nonsense_mediated_decay | ||
|
ENST00000590704 (CIRBP-003)
|
1269332-1272777 | retained_intron | ||
|
ENST00000591055 (CIRBP-026)
|
1269348-1272803 | nonsense_mediated_decay | ||
|
ENST00000591097 (CIRBP-010)
|
1269332-1272604 | nonsense_mediated_decay | ||
|
ENST00000591376 (CIRBP-027)
|
1269348-1274880 | nonsense_mediated_decay | ||
|
ENST00000591622 (CIRBP-022)
|
1261342-1264572 | retained_intron | ||
|
ENST00000591659 (CIRBP-024)
|
1269351-1271639 | protein_coding | ||
|
ENST00000591935 (CIRBP-020)
|
1267229-1274480 | protein_coding | ||
|
ENST00000592051 (CIRBP-013)
|
1261382-1271029 | protein_coding | ||
|
ENST00000592234 (CIRBP-039)
|
1271030-1274810 | nonsense_mediated_decay | ||
|
ENST00000592412 (CIRBP-014)
|
1269331-1272041 | nonsense_mediated_decay | ||
|
ENST00000592467 (CIRBP-012)
|
1261166-1264572 | retained_intron | ||
|
ENST00000592815 (CIRBP-019)
|
1267154-1271151 | protein_coding | ||
|
ENST00000593048 (CIRBP-028)
|
1269336-1272600 | nonsense_mediated_decay | ||
|
ENST00000593093 (CIRBP-002)
|
1269332-1274807 | retained_intron | ||
|
ENST00000593128 (CIRBP-023)
|
1269331-1272552 | retained_intron | ||
|
ENST00000593283 (CIRBP-038)
|
1269332-1272057 | retained_intron | ||
|
ENST00000621399 (CIRBP-040)
|
1273554-1274805 | retained_intron | ||
|
ENSG00000167470 (MIDN) midnolin |
ENST00000300952 (MIDN-201)
|
1248553-1259140 | protein_coding | |
|
ENST00000586757 (MIDN-002)
|
1248553-1254430 | protein_coding | ||
|
ENST00000586843 (MIDN-004)
|
1251562-1254302 | protein_coding | ||
|
ENST00000590136 (MIDN-005)
|
1253684-1254303 | retained_intron | ||
|
ENST00000591302 (MIDN-003)
|
1251261-1254237 | retained_intron | ||
|
ENST00000591446 (MIDN-001)
|
1249888-1258699 | protein_coding | ||
| CIL_0000QP_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000035621-ENSMUSG00000045193 | CGP | 10090 | 10:80148272-80172786 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000035621 (Midn) midnolin |
ENSMUST00000042057 (Midn-001)
|
80148272-80158368 | protein_coding | |
|
ENSMUST00000099492 (Midn-002)
|
80148272-80158367 | protein_coding | ||
|
ENSMUST00000124179 (Midn-003)
|
80149886-80153687 | processed_transcript | ||
|
ENSMUST00000144526 (Midn-004)
|
80151238-80153696 | protein_coding | ||
|
ENSMUST00000146516 (Midn-005)
|
80151154-80154472 | protein_coding | ||
|
ENSMUST00000151202 (Midn-007)
|
80149112-80150278 | protein_coding | ||
|
ENSMUST00000153477 (Midn-006)
|
80150457-80153868 | protein_coding | ||
|
ENSMUSG00000045193 (Cirbp) cold inducible RNA binding protein |
ENSMUST00000054666 (Cirbp-005)
|
80167840-80172786 | protein_coding | |
|
ENSMUST00000105365 (Cirbp-001)
|
80167778-80171655 | protein_coding | ||
|
ENSMUST00000139935 (Cirbp-004)
|
80167863-80170129 | retained_intron | ||
|
ENSMUST00000140774 (Cirbp-002)
|
80167886-80171137 | retained_intron | ||
|
ENSMUST00000147190 (Cirbp-006)
|
80171982-80172698 | retained_intron | ||
|
ENSMUST00000151321 (Cirbp-003)
|
80170227-80171204 | retained_intron | ||
|
ENSMUST00000154726 (Cirbp-007)
|
80165985-80170316 | protein_coding | ||
Expression Patterns
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