C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | troponin T type 1 (skeletal, slow) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000588981  |
TNNT1-002 |
ENSG00000105048 |
9606 | - |
19:55132794-55149354  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003RJ | CIL_0003RJ_0001 | CGP | 19:55090913-55149354 |
| CIL_00065K | CIL_00065K_0001 | CGP | 19:55132794-55157773 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003009 | IMP | skeletal muscle contraction |
| GO:0005523 | IMP | tropomyosin binding |
| GO:0005829 | TAS | cytosol |
| GO:0005861 | IMP:IEA | troponin complex |
| GO:0006937 | IEA | regulation of muscle contraction |
| GO:0030049 | TAS | muscle filament sliding |
| GO:0031014 | IEA | troponin T binding |
| GO:0031444 | IEA | slow-twitch skeletal muscle fiber contraction |
| GO:0045932 | IDA | negative regulation of muscle contraction |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000108587
|
Tnnt1-002 | protein_coding | Mus_musculus | 0 | 671 |
|
ENSMUST00000071798
|
Tnnt1-001 | protein_coding | Mus_musculus | 0 | 662 |
|
ENSMUST00000178163
|
Tnnt1-201 | protein_coding | Mus_musculus | 0 | 623 |
|
ENSMUST00000166959
|
Tnnt1-006 | protein_coding | Mus_musculus | 0 | 617 |
|
ENSMUST00000166268
|
Tnnt1-011 | protein_coding | Mus_musculus | 0 | 525 |
|
ENSMUST00000163710
|
Tnnt1-003 | protein_coding | Mus_musculus | 0 | 523 |
|
ENSMUST00000166161
|
Tnnt1-004 | protein_coding | Mus_musculus | 0 | 518 |
|
ENSMUST00000169571
|
Tnnt1-008 | retained_intron | Mus_musculus | 0 | 324 |
