C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: troponin T1, skeletal, slow
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169571 Tnnt1-008 ENSMUSG00000064179 10090 - 7:4507600-4509798 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonKidneyLiverOvaryPlacentaENSMUST00000169571
Transcript ID Adipose Adrenal Colon Kidney Liver Ovary Placenta
ENSMUST00000169571 0.132±0.00 0.568±0.00 0.404±0.18 0.325±0.26 1.362±0.61 0.812±0.00 5.175±4.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003RJ CIL_0003RJ_0002 CGP 7:4481520-4516382
CIL_00065K CIL_00065K_0002 CGP 7:4504570-4524229

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000291901 TNNT1-003 protein_coding Homo_sapiens 0 333
ENST00000356783 TNNT1-001 protein_coding Homo_sapiens 0 333
ENST00000536926 TNNT1-201 protein_coding Homo_sapiens 0 333
ENST00000585321 TNNT1-011 protein_coding Homo_sapiens 0 333
ENST00000587089 TNNT1-014 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000587465 TNNT1-012 protein_coding Homo_sapiens 0 333
ENST00000587758 TNNT1-005 protein_coding Homo_sapiens 0 333
ENST00000588426 TNNT1-007 protein_coding Homo_sapiens 0 285
ENST00000588981 TNNT1-002 protein_coding Homo_sapiens 0 324
ENST00000589745 TNNT1-016 protein_coding Homo_sapiens 0 291
ENST00000593046 TNNT1-009 protein_coding Homo_sapiens 0 320
ENST00000593194 TNNT1-015 protein_coding Homo_sapiens 0 333

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