C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutathione peroxidase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000589115 GPX4-007 ENSG00000167468 9606 + 19:1104008-1106779 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonTestisENST00000589115
Transcript ID Adrenal Brain Breast Colon Testis
ENST00000589115 29.052±0.00 120.015±0.00 305.096±0.00 2.982±0.00 177.135±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QU CIL_0000QU_0001 CGP 19:1086579-1106791
CIL_0000QT CIL_0000QT_0001 CGP 19:1103926-1174283

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004602 IEA glutathione peroxidase activity
GO:0006979 IEA response to oxidative stress
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105372 Gpx4-001 protein_coding Mus_musculus 0 654
ENSMUST00000097227 Gpx4-002 protein_coding Mus_musculus 0 558
ENSMUST00000183037 Gpx4-007 protein_coding Mus_musculus 0 532
ENSMUST00000145703 Gpx4-003 processed_transcript Mus_musculus 0 422

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