C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000590684 TCF3-004 ENSG00000071564 9606 - 19:1611056-1619347 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyMusclePlacentaENST00000590684
Transcript ID Bladder Brain Breast Colon Heart Kidney Muscle Placenta
ENST00000590684 1.084±0.00 0.785±0.00 0.975±0.00 1.099±0.00 1.017±0.75 0.865±0.00 4.297±3.49 6.300±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004BR CIL_0004BR_0001 CGP 19:1597172-1652605
CIL_000188 CIL_000188_0001 CGP 19:1609290-1780988

Gene Ontology

GO IDEvidence TypeGO Description
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000156990 Tcf3-010 protein_coding Mus_musculus 0 658
ENSMUST00000020379 Tcf3-011 protein_coding Mus_musculus 0 658
ENSMUST00000105341 Tcf3-009 protein_coding Mus_musculus 0 658
ENSMUST00000105343 Tcf3-007 protein_coding Mus_musculus 0 658
ENSMUST00000105345 Tcf3-002 protein_coding Mus_musculus 0 658
ENSMUST00000105344 Tcf3-005 protein_coding Mus_musculus 0 658
ENSMUST00000105340 Tcf3-003 protein_coding Mus_musculus 0 638
ENSDART00000078298 tcf3a-202 protein_coding Danio_rerio 1.4013e-45 187

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