C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156990 Tcf3-010 ENSMUSG00000020167 10090 - 10:80410054-80430985 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartENSMUST00000156990
Transcript ID Adipose Adrenal Breast Heart
ENSMUST00000156990 5.541±0.00 13.611±0.00 10.682±2.42 2.705±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004BR CIL_0004BR_0002 CGP 10:80402997-80433647
CIL_000188 CIL_000188_0002 CGP 10:80409514-80517276

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000078298 tcf3a-202 protein_coding Danio_rerio 0 207
ENSDART00000130136 tcf3b-202 protein_coding Danio_rerio 1.4013e-45 189
ENSDART00000074228 tcf3b-201 protein_coding Danio_rerio 1.4013e-45 189
ENSDART00000020529 tcf3a-201 protein_coding Danio_rerio 6e-33 147
ENST00000262965 TCF3-201 protein_coding Homo_sapiens 0 1343
ENST00000344749 TCF3-202 protein_coding Homo_sapiens 0 1338
ENST00000395423 TCF3-003 protein_coding Homo_sapiens 0 865
ENST00000453954 TCF3-008 protein_coding Homo_sapiens 0 1317
ENST00000585731 TCF3-005 protein_coding Homo_sapiens 0 527
ENST00000585855 TCF3-015 nonsense_mediated_decay Homo_sapiens 0 477
ENST00000586318 TCF3-007 protein_coding Homo_sapiens 0 244
ENST00000587235 TCF3-017 protein_coding Homo_sapiens 0 521
ENST00000588136 TCF3-002 protein_coding Homo_sapiens 0 1580
ENST00000590436 TCF3-009 protein_coding Homo_sapiens 0 612
ENST00000590605 TCF3-018 retained_intron Homo_sapiens 0 377
ENST00000590684 TCF3-004 protein_coding Homo_sapiens 0 658
ENST00000592395 TCF3-012 nonsense_mediated_decay Homo_sapiens 0 477
ENST00000610756 TCF3-010 retained_intron Homo_sapiens 0 821
ENST00000611869 TCF3-001 protein_coding Homo_sapiens 0 1343

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