C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: coactivator-associated arginine methyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000590699 CARM1-004 ENSG00000142453 9606 + 19:10871673-10921771 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderMuscleENST00000590699
Transcript ID Bladder Muscle
ENST00000590699 0.726±0.00 4.641±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002S5 CIL_0002S5_0001 CGP 19:10836575-10923070
CIL_0004ZT CIL_0004ZT_0002 CGP 19:10871513-10928681

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006479 IEA protein methylation
GO:0008168 IEA methyltransferase activity
GO:0009405 IEA pathogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000130032 Carm1-002 nonsense_mediated_decay Mus_musculus 0 2636
ENSMUST00000115394 Carm1-005 protein_coding Mus_musculus 0 1681
ENSMUST00000034703 Carm1-001 protein_coding Mus_musculus 0 1668
ENSMUST00000154049 Carm1-004 retained_intron Mus_musculus 0 1555
ENSMUST00000115395 Carm1-003 protein_coding Mus_musculus 0 1555
ENSMUST00000147749 Carm1-006 processed_transcript Mus_musculus 0 610
ENSMUST00000132011 Carm1-008 processed_transcript Mus_musculus 0 320
ENSMUST00000139871 Carm1-007 processed_transcript Mus_musculus 0 320
ENSMUST00000130100 Carm1-009 processed_transcript Mus_musculus 5e-24 117

Loading