C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7-like 1 pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000590816 RPL7L1P5-001 ENSG00000267634 9606 - 17:44365014-44365751 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverLungMuscleOvaryTestisENST00000590816
Transcript ID Brain Liver Lung Muscle Ovary Testis
ENST00000590816 0.138±0.00 0.017±0.00 0.018±0.00 0.017±0.00 0.045±0.00 0.051±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B6 CIL_0009B6_0001 VISTA 17:43966083-44567774
CIL_0007ST CIL_0007ST_0001 VISTA 17:44247434-44848646
CIL_0004D6 CIL_0004D6_0002 CGP 17:44353215-44389505

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078286 Rpl7l1-201 protein_coding Mus_musculus 0 573
ENSMUST00000118660 Gm12099-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000119005 Gm11222-001 processed_pseudogene Mus_musculus 0 510
ENSMUST00000079057 1700084J12Rik-001 transcribed_processed_pseudogene Mus_musculus 0 496
ENSMUST00000187707 1700084J12Rik-002 processed_transcript Mus_musculus 0 496

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