C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: REX1, RNA exonuclease 1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000590936 REXO1-004 ENSG00000079313 9606 - 19:1815970-1819963 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000590936
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000590936 7.548±0.00 19.794±0.00 7.198±5.74 5.676±4.58 3.899±2.89 2.550±0.00 8.134±0.00 3.374±0.00 5.039±0.00 15.000±3.27 9.038±0.00 42.690±5.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000187 CIL_000187_0001 CGP 19:1782075-1848463
CIL_00047J CIL_00047J_0001 CGP 19:1815246-1863568

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182604 Rexo1-002 retained_intron Mus_musculus 0 627
ENSMUST00000183233 Rexo1-003 retained_intron Mus_musculus 0 627
ENSMUST00000182260 Rexo1-007 protein_coding Mus_musculus 0 627
ENSMUST00000057910 Rexo1-001 protein_coding Mus_musculus 0 627
ENSMUST00000182682 Rexo1-004 retained_intron Mus_musculus 0 516
ENSMUST00000183160 Rexo1-008 nonsense_mediated_decay Mus_musculus 0 442

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