C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, S
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000592099 PTPRS-001 ENSG00000105426 9606 - 19:5206537-5286163 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungOvaryENST00000592099
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Ovary
ENST00000592099 9.635±0.00 1.852±0.00 6.247±3.38 12.687±10.72 0.610±0.00 2.771±0.00 5.175±0.00 2.443±0.00 20.044±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ON CIL_0005ON_0001 CGP 19:4969113-5340803
CIL_0005OM CIL_0005OM_0001 CGP 19:5158495-5456856

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005001 TAS transmembrane receptor protein tyrosine phosphatase activity
GO:0005515 IPI:IEA protein binding
GO:0005887 TAS integral component of plasma membrane
GO:0006470 IEA protein dephosphorylation
GO:0007155 IEA cell adhesion
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0030198 TAS extracellular matrix organization
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086828 Ptprs-002 protein_coding Mus_musculus 0 5066
ENSMUST00000067538 Ptprs-001 protein_coding Mus_musculus 0 3044
ENSMUST00000143018 Ptprs-003 processed_transcript Mus_musculus 0 2023
ENSDART00000083308 ptprsa-201 protein_coding Danio_rerio 0 1712
ENSDART00000145114 ptprsa-001 protein_coding Danio_rerio 0 1712

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