C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: G patch domain containing 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000592154 GPATCH8-004 ENSG00000186566 9606 - 17:44473290-44503430 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENST00000592154
Transcript ID Kidney
ENST00000592154 3.665±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B6 CIL_0009B6_0001 VISTA 17:43966083-44567774
CIL_0007ST CIL_0007ST_0001 VISTA 17:44247434-44848646
CIL_0005IZ CIL_0005IZ_0001 CGP 17:44372180-44503430

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000127018 Gpatch8-006 processed_transcript Mus_musculus 0 641
ENSMUST00000126804 Gpatch8-004 processed_transcript Mus_musculus 0 333
ENSMUST00000131573 Gpatch8-005 processed_transcript Mus_musculus 0 268
ENSMUST00000125754 Gpatch8-003 processed_transcript Mus_musculus 0 267
ENSMUST00000143842 Gpatch8-001 protein_coding Mus_musculus 0 267

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