C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: INO80 complex subunit C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000592173 INO80C-003 ENSG00000153391 9606 - 18:35452230-35497933 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungOvaryENST00000592173
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Ovary
ENST00000592173 0.529±0.00 4.229±0.00 0.284±0.00 0.230±0.00 0.383±0.21 0.269±0.00 0.063±0.00 0.415±0.07 0.271±0.00 0.202±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FM CIL_0002FM_0002 CGP 18:35452230-35711834

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005730 IDA nucleolus
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0006338 IEA chromatin remodeling
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0031011 IDA Ino80 complex
GO:0071339 IDA MLL1 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153360 Ino80c-001 protein_coding Mus_musculus 0 520
ENSMUST00000055012 Ino80c-004 protein_coding Mus_musculus 0 518
ENSMUST00000125169 Ino80c-003 protein_coding Mus_musculus 0 399

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