C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000593160 CACNA1A-014 ENSG00000141837 9606 - 19:13334055-13365320 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENST00000593160
Transcript ID Colon
ENST00000593160 0.523±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VV CIL_0007VV_0001 VISTA 19:12752697-13356541
CIL_0007ZV CIL_0007ZV_0001 VISTA 19:12767682-13372012

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122053 Cacna1a-002 protein_coding Mus_musculus 0 634
ENSMUST00000121390 Cacna1a-001 protein_coding Mus_musculus 0 634
ENSMUST00000100348 Cacna1b-201 protein_coding Mus_musculus 0 268
ENSMUST00000114447 Cacna1b-003 protein_coding Mus_musculus 0 268
ENSMUST00000041342 Cacna1b-002 protein_coding Mus_musculus 0 268
ENSMUST00000102939 Cacna1b-004 protein_coding Mus_musculus 0 268
ENSMUST00000070864 Cacna1b-001 protein_coding Mus_musculus 0 268

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