C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ribosomal protein S15A, pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000087473 Rps15a-ps2-001 ENSMUSG00000067351 10090 - 19:28742159-28742551 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeLiverENSMUST00000087473
Transcript ID Adipose Liver
ENSMUST00000087473 0.153±0.00 0.042±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000NI CIL_0000NI_0002 CGP 19:28258851-28913960

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322989 RPS15A-001 protein_coding Homo_sapiens 0 436
ENST00000398713 RP11-793K1.1-001 processed_pseudogene Homo_sapiens 0 318
ENST00000403958 RP3-340B19.2-001 processed_pseudogene Homo_sapiens 0 390
ENST00000413110 RPS15AP38-001 processed_pseudogene Homo_sapiens 0 370
ENST00000436276 RPS15AP5-001 processed_pseudogene Homo_sapiens 0 333
ENST00000439856 RPS15AP9-001 processed_pseudogene Homo_sapiens 0 329
ENST00000449183 RPS15AP27-001 processed_pseudogene Homo_sapiens 0 204
ENST00000470598 RPS15AP17-001 processed_pseudogene Homo_sapiens 0 361
ENST00000472521 RPS15AP16-001 processed_pseudogene Homo_sapiens 1e-33 147
ENST00000489168 RPS15AP25-001 processed_pseudogene Homo_sapiens 0 305
ENST00000492525 RPS15AP24-001 processed_pseudogene Homo_sapiens 0 411
ENST00000562935 RPS15A-004 nonsense_mediated_decay Homo_sapiens 0 252
ENST00000563390 RPS15A-002 protein_coding Homo_sapiens 0 436
ENST00000563579 RPS15A-007 protein_coding Homo_sapiens 2e-29 132
ENST00000565420 RPS15A-005 protein_coding Homo_sapiens 0 436
ENST00000569365 RPS15A-011 nonsense_mediated_decay Homo_sapiens 0 368
ENST00000572008 RPS15A-013 nonsense_mediated_decay Homo_sapiens 0 436
ENST00000574723 RPS15A-009 nonsense_mediated_decay Homo_sapiens 0 207
ENST00000575669 RPS15A-003 processed_transcript Homo_sapiens 3e-28 132
ENST00000576008 RPS15A-010 nonsense_mediated_decay Homo_sapiens 0 207
ENST00000576436 RPS15A-012 protein_coding Homo_sapiens 2e-28 132
ENST00000594193 RPS15AP11-001 processed_pseudogene Homo_sapiens 0 392

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