C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sodium channel, voltage-gated, type I, beta subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000595652 SCN1B-002 ENSG00000105711 9606 + 19:35030733-35040073 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENST00000595652
Transcript ID Placenta
ENST00000595652 2.371±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UF CIL_0003UF_0002 CGP 19:34994784-35040448

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001518 IEA voltage-gated sodium channel complex
GO:0006814 IEA sodium ion transport
GO:0017080 IEA sodium channel regulator activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098548 Scn1b-001 protein_coding Mus_musculus 0 357
ENSMUST00000188002 Scn1b-004 protein_coding Mus_musculus 0 316
ENSMUST00000187469 Scn1b-003 retained_intron Mus_musculus 0 237

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