C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sodium channel, voltage-gated, type I, beta subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000596348 SCN1B-005 ENSG00000105711 9606 + 19:35031732-35039219 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverMuscleOvaryENST00000596348
Transcript ID Bladder Breast Colon Heart Kidney Liver Muscle Ovary
ENST00000596348 0.246±0.00 4.273±0.00 1.905±0.00 1.823±0.00 1.747±0.00 3.741±0.00 55.620±0.00 0.694±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UF CIL_0003UF_0002 CGP 19:34994784-35040448

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000187469 Scn1b-003 retained_intron Mus_musculus 0 673
ENSMUST00000098548 Scn1b-001 protein_coding Mus_musculus 0 669
ENSMUST00000188002 Scn1b-004 protein_coding Mus_musculus 0 669

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