C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tripartite motif containing 28
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000597618 TRIM28-008 ENSG00000130726 9606 + 19:58547135-58547906 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000597618
Transcript ID Bladder
ENST00000597618 1.852±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070O CIL_00070O_0001 CGP 19:58513530-58550722
CIL_0006Z2 CIL_0006Z2_0001 CGP 19:58544091-58555124

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005705 Trim28-001 protein_coding Mus_musculus 0 424
ENSMUST00000148354 Trim28-003 retained_intron Mus_musculus 0 285
ENSMUST00000128951 Trim28-004 retained_intron Mus_musculus 6e-38 161
ENSMUST00000142421 Trim28-002 retained_intron Mus_musculus 6e-38 161

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