C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tripartite motif-containing 28
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128951 Trim28-004 ENSMUSG00000005566 10090 + 7:13028021-13029599 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryENSMUST00000128951
Transcript ID Brain Ovary
ENSMUST00000128951 9.349±0.00 22.423±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070O CIL_00070O_0002 CGP 7:13004936-13031035
CIL_0006Z2 CIL_0006Z2_0002 CGP 7:13024152-13034777

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253024 TRIM28-001 protein_coding Homo_sapiens 0 669
ENST00000341753 TRIM28-003 protein_coding Homo_sapiens 0 669
ENST00000594806 TRIM28-005 protein_coding Homo_sapiens 7e-29 132
ENST00000597172 TRIM28-009 retained_intron Homo_sapiens 0 562
ENST00000597423 TRIM28-007 retained_intron Homo_sapiens 0 318
ENST00000597618 TRIM28-008 retained_intron Homo_sapiens 6e-38 161
ENST00000597995 TRIM28-010 retained_intron Homo_sapiens 0 669
ENST00000601150 TRIM28-011 retained_intron Homo_sapiens 0 675

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