C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | high mobility group nucleosomal binding domain 2 pseudogene 46 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000598619  |
HMGN2P46-001 |
ENSG00000179362 |
9606 | + |
15:45555482-45555971  |
transcribed_processed_pseudogene |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004C8 | CIL_0004C8_0002 | CGP | 15:45430529-45522807 |
| CIL_0004QN | CIL_0004QN_0002 | CGP | 15:45479611-45615999 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000102552
|
Hmgn2-003 | protein_coding | Mus_musculus | 0 | 390 |
|
ENSMUST00000102553
|
Hmgn2-001 | protein_coding | Mus_musculus | 0 | 390 |
|
ENSMUST00000075602
|
Gm10282-201 | protein_coding | Mus_musculus | 0 | 390 |
|
ENSMUST00000178676
|
Gm10182-201 | processed_pseudogene | Mus_musculus | 0 | 385 |
|
ENSMUST00000137456
|
Hmgn2-010 | processed_transcript | Mus_musculus | 0 | 372 |
|
ENSMUST00000138458
|
Hmgn2-004 | processed_transcript | Mus_musculus | 0 | 372 |
|
ENSMUST00000105893
|
Hmgn2-009 | protein_coding | Mus_musculus | 0 | 372 |
|
ENSMUST00000123234
|
Hmgn2-012 | protein_coding | Mus_musculus | 0 | 368 |
|
ENSMUST00000125266
|
Hmgn2-011 | processed_transcript | Mus_musculus | 0 | 368 |
|
ENSMUST00000100472
|
Hmgn2-007 | protein_coding | Mus_musculus | 0 | 363 |
|
ENSMUST00000093430
|
Gm7125-201 | processed_pseudogene | Mus_musculus | 0 | 315 |
|
ENSMUST00000121537
|
Gm7931-001 | processed_pseudogene | Mus_musculus | 0 | 315 |
|
ENSMUST00000189273
|
RP23-429J21.2-001 | processed_pseudogene | Mus_musculus | 0 | 307 |
|
ENSMUST00000188317
|
RP24-447G12.2-001 | protein_coding | Mus_musculus | 0 | 302 |
|
ENSMUST00000120483
|
Gm14008-001 | processed_pseudogene | Mus_musculus | 0 | 298 |
|
ENSMUST00000159886
|
Gm10357-001 | processed_pseudogene | Mus_musculus | 0 | 296 |
|
ENSMUST00000120716
|
Hmgn2-ps1-001 | processed_pseudogene | Mus_musculus | 0 | 292 |
|
ENSMUST00000189471
|
RP24-176P22.2-001 | processed_pseudogene | Mus_musculus | 0 | 287 |
|
ENSMUST00000130809
|
Hmgn2-005 | retained_intron | Mus_musculus | 0 | 285 |
|
ENSMUST00000145025
|
Hmgn2-002 | retained_intron | Mus_musculus | 0 | 285 |
|
ENSMUST00000153622
|
Hmgn2-013 | retained_intron | Mus_musculus | 0 | 268 |
|
ENSMUST00000136327
|
Hmgn2-006 | protein_coding | Mus_musculus | 0 | 268 |
|
ENSMUST00000165525
|
Gm16494-201 | protein_coding | Mus_musculus | 0 | 255 |
|
ENSMUST00000097278
|
Gm6594-201 | protein_coding | Mus_musculus | 0 | 250 |
|
ENSMUST00000184601
|
Gm10105-001 | processed_pseudogene | Mus_musculus | 0 | 248 |
|
ENSMUST00000121255
|
Gm6985-001 | processed_pseudogene | Mus_musculus | 0 | 244 |
|
ENSMUST00000120954
|
Gm12196-001 | processed_pseudogene | Mus_musculus | 0 | 241 |
|
ENSMUST00000071770
|
Gm5899-201 | processed_pseudogene | Mus_musculus | 0 | 237 |
|
ENSMUST00000177675
|
Gm20379-201 | processed_pseudogene | Mus_musculus | 0 | 213 |
|
ENSMUST00000120815
|
Gm14069-001 | unprocessed_pseudogene | Mus_musculus | 0 | 195 |
|
ENSMUST00000153501
|
Gm16510-001 | processed_pseudogene | Mus_musculus | 3e-40 | 169 |
|
ENSMUST00000136859
|
Hmgn2-008 | retained_intron | Mus_musculus | 1e-38 | 163 |
