C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000188317 RP24-447G12.2-001 ENSMUSG00000100622 10090 + 13:92305980-92307183 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000188317
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000188317 0.156±0.05 0.138±0.02 0.088±0.07 0.068±0.03 0.203±0.06 0.130±0.05 0.033±0.00 0.071±0.04 0.033±0.02 0.041±0.02 0.283±0.24 0.085±0.06 0.079±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261249 TRMT5-001 protein_coding Homo_sapiens 0 411
ENST00000313559 HMGN2P46-004 processed_transcript Homo_sapiens 0 416
ENST00000361427 HMGN2-001 protein_coding Homo_sapiens 0 905
ENST00000391458 HMGN2P8-001 processed_pseudogene Homo_sapiens 0 274
ENST00000396644 HMGN2P46-003 processed_transcript Homo_sapiens 0 416
ENST00000396645 HMGN2P46-005 processed_transcript Homo_sapiens 0 416
ENST00000398005 HMGN2P39-001 processed_pseudogene Homo_sapiens 0 198
ENST00000409454 HMGN2P46-002 processed_transcript Homo_sapiens 0 606
ENST00000423237 HMGN2P30-001 processed_pseudogene Homo_sapiens 0 189
ENST00000423806 HMGN2P38-001 processed_pseudogene Homo_sapiens 0 255
ENST00000425149 HMGN2P19-001 processed_pseudogene Homo_sapiens 0 252
ENST00000425872 HMGN2P17-001 processed_pseudogene Homo_sapiens 0 529
ENST00000427588 HMGN2P22-001 processed_pseudogene Homo_sapiens 2.00386e-43 178
ENST00000433516 HMGN2P24-001 processed_pseudogene Homo_sapiens 0 278
ENST00000433603 HMGN2P3-001 processed_pseudogene Homo_sapiens 0 307
ENST00000436882 HMGN2P5-001 processed_pseudogene Homo_sapiens 0 313
ENST00000437531 HMGN2P20-001 processed_pseudogene Homo_sapiens 0 268
ENST00000437647 HMGN2P34-001 processed_pseudogene Homo_sapiens 0 244
ENST00000444648 HMGN2P32-001 processed_pseudogene Homo_sapiens 0 257
ENST00000446054 HMGN2P11-001 processed_pseudogene Homo_sapiens 0 228
ENST00000447764 HMGN2P21-001 processed_pseudogene Homo_sapiens 0 226
ENST00000456186 HMGN2P7-001 processed_pseudogene Homo_sapiens 0 296
ENST00000460563 HMGN2-004 processed_transcript Homo_sapiens 0 481
ENST00000463817 HMGN2-006 processed_transcript Homo_sapiens 0 538
ENST00000464888 HMGN2-005 processed_transcript Homo_sapiens 0 257
ENST00000466194 HMGN2-009 processed_transcript Homo_sapiens 0 580
ENST00000467700 HMGN2-007 processed_transcript Homo_sapiens 0 518
ENST00000468388 HMGN2-002 processed_transcript Homo_sapiens 5e-31 137
ENST00000476476 HMGN2P13-001 processed_pseudogene Homo_sapiens 0 237
ENST00000476875 HMGN2P9-001 processed_pseudogene Homo_sapiens 0 207
ENST00000479815 HMGN2-003 processed_transcript Homo_sapiens 0 353
ENST00000493418 HMGN2-008 processed_transcript Homo_sapiens 1.99993e-41 174
ENST00000505955 RP11-79P5.3-002 processed_transcript Homo_sapiens 0 388
ENST00000506772 HMGN2P4-001 processed_pseudogene Homo_sapiens 0 322
ENST00000514718 RP11-79P5.3-001 transcribed_processed_pseudogene Homo_sapiens 0 283
ENST00000529541 HMGN2P36-001 processed_pseudogene Homo_sapiens 0 302
ENST00000533158 RP11-958J22.2-001 processed_pseudogene Homo_sapiens 0 202
ENST00000551091 HMGN2P6-001 processed_pseudogene Homo_sapiens 0 296
ENST00000556317 RP11-193F5.4-001 processed_pseudogene Homo_sapiens 0 189
ENST00000564594 HMGN2P46-007 processed_transcript Homo_sapiens 0 198
ENST00000566875 HMGN2P40-001 processed_pseudogene Homo_sapiens 0 346
ENST00000569073 CTD-2562G15.2-001 processed_pseudogene Homo_sapiens 0 237
ENST00000585707 HMGN2P15-001 processed_pseudogene Homo_sapiens 0 302
ENST00000588627 RPL12P38-002 processed_transcript Homo_sapiens 0 719
ENST00000598619 HMGN2P46-001 transcribed_processed_pseudogene Homo_sapiens 0 302
ENST00000602394 RP11-158D2.1-001 processed_pseudogene Homo_sapiens 0 259
ENST00000612378 AC243587.1-201 processed_pseudogene Homo_sapiens 0 313
ENST00000619352 HMGN2-201 protein_coding Homo_sapiens 0 904

Loading