C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SMG9 nonsense mediated mRNA decay factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000598860 SMG9-011 ENSG00000105771 9606 - 19:43733424-43734825 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryENST00000598860
Transcript ID Adrenal Ovary
ENST00000598860 5.825±0.00 3.951±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000148288 Smg9-005 retained_intron Mus_musculus 0 305
ENSMUST00000002280 Smg9-001 protein_coding Mus_musculus 0 305
ENSMUST00000123188 Smg9-007 protein_coding Mus_musculus 0 220
ENSMUST00000146686 Smg9-006 retained_intron Mus_musculus 4.06377e-44 182

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