C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RAB11B, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000600719 RAB11B-004 ENSG00000185236 9606 + 19:8389981-8402550 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENST00000600719
Transcript ID Heart
ENST00000600719 1.997±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NQ CIL_0002NQ_0001 CGP 19:7926718-8445041
CIL_0000UT CIL_0000UT_0001 CGP 19:7958579-8445041

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0007264 IEA small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057373 Rab11b-001 protein_coding Mus_musculus 0 640
ENSMUST00000178377 Rab11b-ps2-201 processed_pseudogene Mus_musculus 0 634
ENSMUST00000173987 Rab11b-004 nonsense_mediated_decay Mus_musculus 0 606
ENSMUST00000173860 Rab11b-002 protein_coding Mus_musculus 0 556
ENSDART00000123392 rab11bb-201 protein_coding Danio_rerio 0 473
ENSMUST00000172894 Rab11b-005 protein_coding Mus_musculus 0 472
ENSDART00000036452 rab11bb-001 protein_coding Danio_rerio 0 462
ENSDART00000061366 rab11ba-001 protein_coding Danio_rerio 0 436
ENSDART00000133793 rab11ba-002 protein_coding Danio_rerio 0 435
ENSDART00000008920 rab11al-001 protein_coding Danio_rerio 0 364
ENSMUST00000174744 Rab11b-003 processed_transcript Mus_musculus 0 333
ENSDART00000148739 rab11ba-003 retained_intron Danio_rerio 1.99965e-42 176

Loading