C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Protein LOC101928524 {ECO:0000313|Ensembl:ENSP00000469443}
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000601460 RP11-295P9.3-007 ENSG00000239665 9606 + 10:13610047-13655929 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000968 CIL_000968_0001 VISTA 10:13045564-13647145
CIL_000965 CIL_000965_0001 VISTA 10:13372414-13973663
CIL_000966 CIL_000966_0001 VISTA 10:13410200-14012149
CIL_00045D CIL_00045D_0002 CGP 10:13438484-13630868
CIL_00061W CIL_00061W_0002 CGP 10:13610047-14462142

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005681 IEA spliceosomal complex
GO:0008380 IEA RNA splicing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000152362 Prpf18-002 protein_coding Mus_musculus 0 765
ENSMUST00000035721 Prpf18-001 protein_coding Mus_musculus 0 765
ENSMUST00000153881 Prpf18-003 processed_transcript Mus_musculus 0 608

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