C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000601609 PPFIA4-013 ENSG00000143847 9606 + 1:203045409-203046507 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLungENST00000601609
Transcript ID Breast Lung
ENST00000601609 0.843±0.00 0.625±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TW CIL_0000TW_0002 CGP 1:203007386-203078740
CIL_0000TV CIL_0000TV_0002 CGP 1:203026498-203086036

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000189361 Ppfia4-003 protein_coding Mus_musculus 0 593
ENSMUST00000168515 Ppfia4-001 protein_coding Mus_musculus 0 593
ENSMUST00000168134 Ppfia1-003 protein_coding Mus_musculus 0 231
ENSMUST00000182226 Ppfia1-002 protein_coding Mus_musculus 0 228

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