C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000602289 RP11-535M15.2-003 ENSG00000233820 9606 + 9:96726730-96727469 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastKidneyLungMuscleOvaryPlacentaTestisENST00000602289
Transcript ID Adrenal Brain Breast Kidney Lung Muscle Ovary Placenta Testis
ENST00000602289 0.069±0.00 0.295±0.10 0.053±0.00 0.155±0.00 0.117±0.00 0.205±0.00 0.102±0.03 0.133±0.12 0.109±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Z5 CIL_0008Z5_0001 VISTA 9:96215463-96816013

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031985 Mkrn1-001 protein_coding Mus_musculus 0 815
ENSMUST00000114823 Mkrn1-004 protein_coding Mus_musculus 0 815
ENSMUST00000122035 Mkrn1-ps1-001 processed_pseudogene Mus_musculus 0 566
ENSMUST00000150575 Mkrn1-007 protein_coding Mus_musculus 0 518
ENSMUST00000121895 Gm15989-001 processed_pseudogene Mus_musculus 0 494

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