C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: makorin, ring finger protein, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000150575 Mkrn1-007 ENSMUSG00000029922 10090 - 6:39399143-39404730 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENSMUST00000150575
Transcript ID Ovary Placenta Testis
ENSMUST00000150575 43.577±0.00 32.705±0.05 338.357±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZU CIL_0008ZU_0002 VISTA 6:38939568-39543498
CIL_000305 CIL_000305_0002 CGP 6:39381175-39420462

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000255977 MKRN1-001 protein_coding Homo_sapiens 0 647
ENST00000417517 RP11-342M1.6-001 processed_pseudogene Homo_sapiens 0 460
ENST00000433469 MKRN7P-001 processed_pseudogene Homo_sapiens 0 374
ENST00000438726 AC009969.1-001 processed_pseudogene Homo_sapiens 0 200
ENST00000443720 MKRN1-002 protein_coding Homo_sapiens 0 444
ENST00000444706 MKRN4P-001 processed_pseudogene Homo_sapiens 0 444
ENST00000445263 MKRN5P-001 processed_pseudogene Homo_sapiens 0 427
ENST00000445872 RP11-535M15.2-001 transcribed_processed_pseudogene Homo_sapiens 0 440
ENST00000463142 MKRN1-018 protein_coding Homo_sapiens 0 695
ENST00000468447 MKRN1-017 retained_intron Homo_sapiens 0 418
ENST00000474576 MKRN1-007 protein_coding Homo_sapiens 0 647
ENST00000475010 MKRN1-006 retained_intron Homo_sapiens 0 652
ENST00000480552 MKRN1-015 protein_coding Homo_sapiens 0 346
ENST00000495305 MKRN1-003 nonsense_mediated_decay Homo_sapiens 0 647
ENST00000496169 MKRN1-005 nonsense_mediated_decay Homo_sapiens 0 444
ENST00000546624 MKRN9P-001 transcribed_processed_pseudogene Homo_sapiens 0 481
ENST00000599191 MKRN9P-002 processed_transcript Homo_sapiens 0 523
ENST00000602289 RP11-535M15.2-003 processed_transcript Homo_sapiens 0 518

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