C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription elongation factor B (SIII), polypeptide 1 pseudogene 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000603716 TCEB1P33-001 ENSG00000271278 9606 + 4:39932454-39933561 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000603716
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000603716 0.282±0.00 0.470±0.00 0.207±0.00 0.176±0.00 0.082±0.00 0.062±0.00 0.360±0.31 0.216±0.14 0.059±0.02 0.133±0.07 0.082±0.00 0.097±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TZ CIL_0002TZ_0002 CGP 4:39698044-39977956
CIL_0002TY CIL_0002TY_0002 CGP 4:39822863-40158252

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000186701 Tceb1-007 protein_coding Mus_musculus 8e-27 124
ENSMUST00000185393 Tceb1-009 protein_coding Mus_musculus 8e-27 124
ENSMUST00000185771 Tceb1-006 protein_coding Mus_musculus 8e-27 124
ENSMUST00000187910 Tceb1-005 protein_coding Mus_musculus 8e-27 124
ENSMUST00000186948 Tceb1-004 protein_coding Mus_musculus 8e-27 124
ENSMUST00000115352 Tceb1-001 protein_coding Mus_musculus 8e-27 124
ENSMUST00000188641 Tceb1-002 protein_coding Mus_musculus 8e-27 124
ENSMUST00000119040 Gm14517-001 processed_pseudogene Mus_musculus 7e-18 95

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