C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000604416 RP11-1029M24.4-001 ENSG00000270285 9606 + 3:48039267-48039490 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastPlacentaTestisENST00000604416
Transcript ID Breast Placenta Testis
ENST00000604416 0.554±0.00 0.216±0.00 0.220±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007U6 CIL_0007U6_0001 VISTA 3:47843366-48458182

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053150 Rps27rt-001 protein_coding Mus_musculus 1.96182e-44 182
ENSMUST00000170122 Rps27-201 protein_coding Mus_musculus 1.96182e-44 182
ENSMUST00000118062 Gm15531-001 processed_pseudogene Mus_musculus 3.00004e-41 171
ENSMUST00000173599 Gm19246-001 processed_pseudogene Mus_musculus 2e-34 148
ENSMUST00000119835 Gm14175-001 unprocessed_pseudogene Mus_musculus 4e-31 137

Loading